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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9507458 chr13:25645518 C/T C15orf21 chr15:45803334-45848928:+ 0.39 6.46 2.61E-10 Box Plot
THCA rs9531235 chr13:82238497 C/T LHX1 chr17:35294084-35301912:+ 0.39 6.39 3.97E-10 Box Plot
THCA rs9541385 chr13:69064169 G/A METTL12 chr11:62432781-62435968:+ -0.28 -5.92 6.15E-9 Box Plot
THCA rs9545748 chr13:82084083 C/G LHX1 chr17:35294084-35301912:+ 0.3 6.49 2.1E-10 Box Plot
THCA rs9545764 chr13:82106227 T/G LHX1 chr17:35294084-35301912:+ 0.33 6.67 7.02E-11 Box Plot
THCA rs9545766 chr13:82109520 C/T LHX1 chr17:35294084-35301912:+ 0.32 6.41 3.59E-10 Box Plot
THCA rs9545767 chr13:82109753 T/G LHX1 chr17:35294084-35301912:+ 0.33 6.6 1.12E-10 Box Plot
THCA rs9545823 chr13:82230393 C/T LHX1 chr17:35294084-35301912:+ 0.39 6.39 3.92E-10 Box Plot
THCA rs954846 chr2:101132660 A/T LOC285359 chr3:101431278-101432259:+ 0.36 8.21 2.15E-15 Box Plot
THCA rs9554877 chr13:103135483 C/T VWA2 chr10:115999089-116051272:+ 0.27 6.3 6.67E-10 Box Plot
THCA rs956108 chr14:39763111 G/A LOC647288 chr13:75811890-75814517:- -0.54 -9.95 2.61E-21 Box Plot
THCA rs956109 chr14:39763006 T/C LOC647288 chr13:75811890-75814517:- 0.6 12.81 1.63E-32 Box Plot
THCA rs957345 chr14:75276079 C/G EIF5B chr2:99953816-100017789:+ -0.28 -5.99 4.13E-9 Box Plot
THCA rs958648 chr8:11103895 A/G SGK223 chr8:8175258-8244008:- 0.35 7.11 4.32E-12 Box Plot
THCA rs959558 chr9:123368911 C/G SLFN11 chr17:33677324-33700720:- 0.26 5.9 7.0E-9 Box Plot